2024-03-29T13:03:45Z
https://biosystecol.oeaw.ac.at/oai.php
10.1553/biosystecol.1.e71620
2021-11-11
biosystecol
Universidad Nacional de Colombia, Facultad de Ciencias Agrarias, Bogotá, Colombia
author
González-Montaña, Luis
https://orcid.org/0000-0002-9136-9932
2021-11-11
2021-11-11
2021
Biosystematics and Ecology
2710-298X
1026-4949
1
e71620
2021
G.
Antoniou
author
2008
A Semantic Web Primer
2008
287
10.1038/npre.2010.4636.1
10.17615/ade1-0906
10.1093/sysbio/syt028
Collembola
P.
Bellinger
author
text
https://collembola.org
10.3897/zookeys.569.6629
10.17161/bi.v5i0.46
10.1002/asi.22618
10.1002/pra2.2015.145052010020
10.1093/database/baaa079
10.1093/database/bav040
10.25919/wmhe-qc95
Tbox and Abox reasoning in expressive description logics
G.
De Giacomo
author
1996
text
AAAI
www.aaai.org
1996
B.
DuCharme
author
2013
Learning SPARQL: querying and updating with SPARQL 1.1
2013
10.1111/2041-210X.13217
10.3233/sw-180307
10.5281/zenodo.4660322
10.5281/zenodo.4660386
10.1371/journal.pone.0201702
10.1093/nar/gkj068
10.1038/s41467-019-10668-1
10.1093/sysbio/syz067
10.1007/978-3-662-03368-5
J.
Mari Mutt
author
1990
A Catalog of the Neotropical Collembola, Including Nearctic Areas of Mexico, Florida
1990
10.1371/journal.pone.0094056
10.7717/peerj.2682
10.1145/2757001.2757003
10.1111/j.1096-0031.2011.00355.x
10.1007/978-3-540-24745-6_5
10.3390/d11100202
10.1111/j.1096-0031.2007.00161.x
10.1016/j.asd.2019.100877
10.1093/sysbio/syz005
10.1155/2012/391574
10.1111/j.1365-2583.2008.00781.x
10.3897/bdj.6.e22676.figure2
10.1111/j.1096-0031.2009.00286.x
10.1111/cla.12179
10.13140/rg.2.2.28314.29124
10.1038/sdata.2016.18
10.1017/cbo9781316338797.009
10.1093/sysbio/syw108
10.1186/1471-2105-14-126
Using parallel texts to improve recall in IE
M.
Wood
author
2003
text
Proceedings of Recent Advances in Natural Language Processing (RANLP ’03)
2003
10.1371/journal.pone.0015991
M.
Yoder
author
A.
Thessen
author
2018
Application of semantic technology in biodiversity science
2018
10.1553/biosystecol.1.e71620
https://biosystecol.oeaw.ac.at/article/71620/
https://biosystecol.oeaw.ac.at/article/71620/download/pdf/
https://biosystecol.oeaw.ac.at/article/71620/download/xml/
The production of semantic annotations has gained renewed attention due to the development of anatomical ontologies and the documentation of morphological data. Two methods are proposed in this production, differing in their methodological and philosophical approaches: class-based method and instance-based method. The first, the semantic annotations are established as class expressions, while in the second, the annotations incorporate individuals. An empirical evaluation of the above methods was applied in the morphological description of Neotropical species of the genus Lepidocyrtus (Collembola: Entomobryidae: Lepidocyrtinae). The semantic annotations are expressed as RDF triple, which is a language most flexible than the Entity-Quality syntax used commonly in the description of phenotypes. The morphological descriptions were built in Protégé 5.4.0 and stored in an RDF store created with Fuseki Jena. The semantic annotations based on RDF triple increase the interoperability and integration of data from diverse sources, e.g., museum data. However, computational challenges are present, which are related with the development of semi-automatic methods for the generation of RDF triple, interchanging between texts and RDF triple, and the access by non-expert users.
text/html
en_US
Austrian Academy of Sciences Press
class-based methods
instance-based methods
resource description framework (RDF)
Neotropical region
Hexapoda
Semantic-based methods for morphological descriptions: An applied example for Neotropical species of genus Lepidocyrtus Bourlet, 1839 (Collembola: Entomobryidae)
Research Article
10.1553/biosystecol.2.e113169
2023-11-13
biosystecol
California State Polytechnic University, Arcata, United States of America
author
Wood, William
2023-11-13
2023-11-13
2023
Biosystematics and Ecology
2710-298X
1026-4949
2
e113169
2023
10.1553/biosystecol.2.e113169
https://biosystecol.oeaw.ac.at/article/113169/
https://biosystecol.oeaw.ac.at/article/113169/download/pdf/
https://biosystecol.oeaw.ac.at/article/113169/download/xml/
The oyster plant (Britain) or oyster leaf (North America), Mertensia maritima (L.) Gray has a strong oyster-like odour. Headspace volatiles from fresh crushed leaves of this plant were analysed using solid phase microextraction (SPME) and gas chromatography–mass spectrometry (GC–MS). Dimethyl sulphide was detected emanating from the crushed leaves, a compound that is noted for being a major part of the odour profile of raw oysters.
text/html
en_US
Austrian Academy of Sciences Press
GC-MS
Mertensia maritima (Boraginaceae)
Oyster Leaf
Oyster Plant
Oyster Odour
SPME
Dimethyl sulphide: The oyster-like odourant of Mertensia maritima
Short Communication
10.1553/biosystecol.2.e112764
2023-11-13
biosystecol
Hochschule für Technik und Wirtschaft Dresden, Dresden, Germany
author
Jentzsch, Matthias
https://orcid.org/0000-0003-2413-329X
Unaffiliated, Dresden, Germany
author
Königstein, Maria
2023-11-13
2023-11-13
2023
Biosystematics and Ecology
2710-298X
1026-4949
2
e112764
2023
10.1553/biosystecol.2.e112764
https://biosystecol.oeaw.ac.at/article/112764/
https://biosystecol.oeaw.ac.at/article/112764/download/pdf/
https://biosystecol.oeaw.ac.at/article/112764/download/xml/
The checklist of louse flies in Austria currently comprises 16 species. With Crataerina melbae and Ornithophila metallica, this includes two first records compared to the status of previous publications. The state of research in the federal states varies considerably. With reference to the occurrence of their hosts in Austria, at least four further species are to be expected.
text/html
en_US
Austrian Academy of Sciences Press
Diptera
Hippoboscidae
checklist
Austria
Hippoboscidae (Insecta, Diptera)
Catalogues/Checklist
10.1553/biosystecol.3.e115244
2024-01-29
biosystecol
California State Polytechnic University, Arcata, United States of America
author
Wood, William
California State Polytechnic University, Arcata, United States of America
author
Largent, David L.
Sonoma County Mycological Association, Santa Rosa, United States of America
author
DeShazer, Darvin A.
2024-01-29
2024-01-29
2024
Biosystematics and Ecology
2710-298X
1026-4949
3
e115244
2024
10.1553/biosystecol.3.e115244
https://biosystecol.oeaw.ac.at/article/115244/
https://biosystecol.oeaw.ac.at/article/115244/download/pdf/
https://biosystecol.oeaw.ac.at/article/115244/download/xml/
The “shrimp mushroom”, Russula xerampelina, has a strong cooked shellfish odour. Headspace volatiles from fresh sporocarps of this mushroom were analysed using solid phase microextraction (SPME) and gas chromatography–mass spectrometry (GC–MS). Trimethylamine and trimethylamine N-oxide were the only volatile compounds detected emanating from the fruiting body. Trimethylamine is noted for its fishy, cooked crab or cooked shrimp-like odour. Graphical Abstract
text/html
en_US
Austrian Academy of Sciences Press
GC-MS
Russula xerampelina (Agaricales
Russulaceae)
Shrimp Mushroom
SPME
Trimethylamine
Trimethylamine N-oxide
The cooked shellfish-odour of the mushroom Russula xerampelina
Short Communication